Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797783.1_cds_XP_016456618.1_4992
CDS Infomation

[gene=LOC107780582] [db_xref=GeneID:107780582] [protein=probable serine/threonine-protein kinase At4g35230] [protein_id=XP_016456618.1] [location=complement(join(4071..4322,13045..13158,13457..13615,13701..13889,14669..14754,15712..15817,16700..16833,18382..18517,18735..18940,19161..19245))] [gbkey=CDS]
Sequence

ATGGGCTGTTTCCAGTCCAAAACTGTCAATGTTAAGTCCACCATCGAAGAACCTCCTAAA
GAGGACGACTCCAAAACAGATCTTGCTAATGGGGATCAAGTGCCAGCGTTCAAGGAATTT
GCTCTTGCGGATCTCCGAGCTGCAACGAATGGGTTTAGCAGTGAATTGATAGTTTCTGAA
AGTGGTGAGAAAGCACCCAATATTGTCTACAGAGGGAAGCTTCGGAGCAACCGGCTTGTT
GCCATTAAGCGCTTCTCAAAGCAGTCATGGCCTGATCCTCATCAGTTTGTGGCAGAGGCT
GCTGGAGTGGGCAAAGTCAGACATAAGAGATTGGTCAATCTAATTGGTTGCTGTGCTGAG
GGAGATGAAAGACTTTTGGTGGCAGAGTACATGCCTAATGATACACTCTCAAAGCATCTC
TTTCACTGGGAAAAACAGCCCTTGCCTTGGGAGATGCGAGTCAGAGTTGCATACCATATT
GCACAGGTTCTGGATCATTGCAATGCTGAGAACAGAAATATATATCATGATTTGAATGCT
TACAGAGTTCTTTTTGATGAGGATGGTGACCCTCGATTATCTAGCTTTGGCCTTATGAAA
AACAGTAGAGATGGAAAGAGTTATAGCACTAATCTGGCCTATACACCTCCTGAGTTTATG
CGTACAGGCAGGGTCATTGCGGAGAGTGTAATATACAGCTATGGGACTGTTCTGCTGGAC
CTTTTGAGTGGAAAACATATTCCTCCAAGCCATGCATTAGATTTGATAAGGGGAAAGAAT
ATGTTGTTACTAATGGATTCATCCTTGGAAGGACAATATGCCGATGAAGATGCTACTGCA
TTGGTTGAGCTTGCTTCGACGTGCCTCCAGTACGAGGCTAAAGATCGGCCTGATTTCAAG
TTCATTCTTAATGCTGTATTACCTCTCCAGAAGCAAGGGGAGGTTGTATCATATGTTTTA
ATGGGTCTAAGAAAAGCTCCAGTAGTGCTTCCAACCATGCTTTCTCCTCTTGGAAAGGCT
TGTGCAAGAATGGACCTTACCGCTGTTTATGATATGTTGCTTAAGACAGGTTATAAAGAT
GAAGAGGGTGCCGAAAATGAGCTCTCATTCCAAGAGTGGACACAGCAAGTTCAAGATATG
TTAAACACCAAGAAATTTGGTGATATTGCTTTCAGGGATAAGGACTTTAAGAGTGCAATT
GATTGTTATTCGAAGTTAGTGTCTATGATGCCTGTTCCTTCTGGGACTGTTTTTGTGAGG
AGAGCCCTCGCGTATTTGATGAATGGCCAGCCAGAACTTGCATTGAGGGATGCTATGCAG
GCTCAGGTCTGCTTGCCCGAGTGGCCTACTGCATTCTATATGCAGGCTCTTGCCCTCTCC
AAACTTGGAATGGAAATTGATGCACAAGACATGTTAAACGATGGAGCGTCCTTTGAAGCA
AAGAAGCAGAACAGTTGGCGCAACTGA

Peptide Sequence

PEP ID

XP_016456618.1
PEP Infomation

PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nicotiana tabacum]
Sequence

MGCFQSKTVNVKSTIEEPPKEDDSKTDLANGDQVPAFKEFALADLRAATNGFSSELIVSE
SGEKAPNIVYRGKLRSNRLVAIKRFSKQSWPDPHQFVAEAAGVGKVRHKRLVNLIGCCAE
GDERLLVAEYMPNDTLSKHLFHWEKQPLPWEMRVRVAYHIAQVLDHCNAENRNIYHDLNA
YRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFMRTGRVIAESVIYSYGTVLLD
LLSGKHIPPSHALDLIRGKNMLLLMDSSLEGQYADEDATALVELASTCLQYEAKDRPDFK
FILNAVLPLQKQGEVVSYVLMGLRKAPVVLPTMLSPLGKACARMDLTAVYDMLLKTGYKD
EEGAENELSFQEWTQQVQDMLNTKKFGDIAFRDKDFKSAIDCYSKLVSMMPVPSGTVFVR
RALAYLMNGQPELALRDAMQAQVCLPEWPTAFYMQALALSKLGMEIDAQDMLNDGASFEA
KKQNSWRN

Transcript Sequence

Gene sequence data has not been registered.